The Horizon and the Honolulu Zoo
0About a week ago I had stayed up way to late to work on a project that has been on simmer for quite a while now. Basically, I am trying to adjust known sunrise and set equations (and results) to account for the local topography. Where I live in Hawaii is next to the mountains, as such, the sun “sets” bellow the mountains a full hour before it sets over the ocean. To accomplish this, I was going to need to figure out where the earth-sky interface is using whatever GIS data I could get my hands on. I was up till 0300 yet no success. The dataset that I was using was large, consisting of a 1 by 1 degree portion of earth at 1 arc-second resolution. This means that there are approximately 3000 points in each direction (x,y). This means I would need to process about 9 million points. The difficulty arose when trying to find individual points to test. How would I get the correct elevation data? At first I tired putting the data into a kdtree and then performing a nearest neighbor search on it. While this was successful, it was prohibitively slow, taking about 15 seconds to find the closest point in the data to any arbitrary coordinates searched for. Since I test about 800,000 points it would have taken over 100 days to finish. I realized the next morning that I knew what the shape of the data was and that I should be able to quickly calculate where in the array the desired point should be. This method was very successful and the run time for the entire earth-sky interface program was reduced to 15(ish) seconds. The figure below is the results for a point between the residence halls and the academic center.
This past friday (Good Friday). I went to the Honolulu Zoo in Waikiki (I think). This was the first time going to the Honolulu zoo and I was eager to see how it compared to the San Diego Zoo. A good time was had and lots of animals were seen (they even have a snake!) While I felt that the elephant enclosure was too small, a new much larger elephant area is being constructed, I hope they finish soon. Like many places in Hawaii, there were peacocks running wild around the place.
As for how it compares to the San Diego Zoo (my home town zoo), the Honolulu Zoo was much smaller. I have spent entire days at the San Diego Zoo and I’m pretty sure that I have never managed to see everything there. The Honolulu Zoo in comparison was small enough that the complete circuit around took maybe a little more than 2 hours.
The smallness doesn’t affect the good time that was had though. Besides, they had a cute fox!
Finals are in… two weeks!
-Barna
Massive Update (again?)!
0It has been a while, things got busy, HPU has a new website (did you check it out?) and the link to the student blog page was subsequently lost. Well here it is, everything that I could think of to post in as chronological of an order as I can muster.
One of the things that happened pretty soon after I got back from the cruise was the closure of the Don Quijote (that is how you spell it) in Kailua. I had only discovered this wonderful store maybe a little over a year ago, since then it had become my go to place for shopping. I went to one of the last days it was open.
Since they were no longer restocking the shelves, it was interesting to me to see what they still had and didn’t have (as some sort of indication to the popularity of the goods). While the ramen, nori and candy pretty much flew off the shelf (there was no ramen left), coming to the soft drinks section, I wouldn’t even know that they were no longer restocking.
In japanese class we have been going over the various informal forms of verbs and how to speak informally in general. All this new conjugation feels very complicated and I often try to find examples of the stuff we are learning in Japanese in English. I figure, if I can deal with the arbitrary rules of English, I can deal with the rather sane rules in Japanese.
One of the best, fun things about living in a different place is the new foods. A friend and I recently ate at a relatively new establishment in Kaneohe called Fresh Catch, which specialized in poke and seafoods in general (hence the name). Not knowing what I wanted, I opted for whatever the special was for that day. It turned out to be a crab stuffed ahi roll which was quite delicious.
Though, one of the not so fun things about being in a place different from home is the lack of my established comfort foods (mainly mexican). At the suggestion of one of the staff at HPU, I went to check out a place called Serge’s Mexican Kitchen in Manoa. Much to my delight it was very close to what I can get in San Diego and they even had Mexican Coke (uses sugar rather than HFCS).
A tsunami happened that was triggered by a very large earthquake off the coast of Japan. Being the only oceanography student in my residence hall, I became very popular that night, mostly reassuring people that where we were on the Hawaii Loa Campus was well above sea level and there was no chance of this tsunami getting us. While Hawaii did have some major damage on the Big Island, we fared relatively well compared to the devastation as seen in Japan (not counting the nuclear crisis). This has not affected my desire to some day study in Japan.
HPU’s annual talent show, Da Freakshow, was March 15th (I think). I helped out backstage as the stagemanager’s runner. The event itself went well and I’m sure from the audiences perspective, nothing went wrong. From my perspective, it was pretty much one crisis after another (all mini crisises). It was my job to make sure that the performers were queued up before they are to go on stage and so I was constantly about 3 acts ahead of what the audience was seeing. Afterwards, I crashed hard with some good sleep (though it screwed up the rest of the week for me).
Finally, I was selected to be a President’s Host. It will be my responsibility to represent the university at various events and whatever else I’m asked to do or volunteer for. I must apologize for not giving a full description of what I will be doing as I’m not sure myself. The induction ceremony was… yesterday, and I had the opportunity to meet the (soon to be retired) university president.
More updates more frequently I hope for the future!
-Barna
Tsunami and such
0Friends and Family,
One is on the way. I’m in a safe location. The ATT network on Oahu is freaking out, presumably from heavy usage. It is unlikely that you will be able to call me.
Information can be found here:
http://www.staradvertiser.com/
http://www.weather.gov/ptwc/?region=2
Please don’t worry.
-Barna (A)
EXITS Cruise 2 Photos
0Photo time children! Click on the panoramas to get a larger version (pops).

This is the bridge of the R/V Kilo Moana. Naturally it has a commanding view of the surrounding oceans. Everything regarding ships position can be controlled from this location, even some engineering functions (but not all) can be controlled from this position. While the wheel in the middle does work and was how I controlled the ship when they let me drive, it usually goes unused.

This is the main control room (MCR). From this position all the ships engineering systems are monitored, that would include the freshwater supplies and things like the sewage system, not just the engines, motors and other various propulsion systems. The system makes you push a button every 30 minutes to ensure that someone is alert and paying attention.

The mess is where all meals are eaten (most of the time). You can see the galley (where meals are prepared) through the two openings to the left of the clock. This ship had some of the best food I’ve had while at sea.

The ship had an extensive computer network and all network communications were fiberoptic. This was the fiber network was largely due to necessity, the ship is very ‘noisy’ meaning that electrical signals are disrupted by EM noise coming from the ship. Fiber is unaffected by this. Any and all computer systems were managed by something in this room.

The wetlab is where the rosette lived. Or I guess any other instruments that go in the water. If we were doing sampling, this is the room that it would be happening in. Out the door (to the ocean) there is no rosette sitting on the deck, meaning that it was deployed when this photo was taken.

This is the lab I spent most of my time in. Using the radio we would communicate with the winch operator our desires for what we wanted to do. We also controlled and monitored the instruments on the rosette from this room.

The ship could be controlled by portable control stations. This one is on the stern of the ship and is being controlled by the captain himself. I was told that it takes about 5 minutes to completely transfer control from the bridge to one of these stations as they do it one control at a time to ensure that someone has control at all times.

Probably the roughest day we had. Luckily it was mostly during transit, though one test/training cast was done with the CTD/LADCP. Quite exciting given the conditions.

This was the main float for the moorings and the first part to be recovered. The mooring is sub surface until the release command is given, then this floats to the surface pretty quickly.

This is a picture of my stateroom, I never did use that fridge.

This is one of the mooring anchors being deployed, the large mass is what keeps it down and the actual anchor is there to keep the mass from moving down a hill. This mooring was deployed on steep topography.

Same as above, but notice that the release mechanism failed, the line was cut using a pocket knife taped to a long pole.

This is the starboard shaft seal, on this side, air, on the other side of the red wall, water and lots of it. Though it isn’t leaking now, a small leak is within specifications and would be considered normal. In the event of a complete failure (which can happen), the compartment I was in would fill so fast with water that I would not be able to escape it.
EXITS Cruise 2 Day 11
02011.01.24
19:36HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 20 24.303 N
Lon: 158 50.004 W
Speed: 12 Kts
Heading: 47
Sal: 35.227 PSU
SST: 25 °C
Pres: 1015 mbar
Air Temp: 23 °C
Weather and Sea State Observations
Swell height perhaps 0-1 meter. Cloud cover is 25% or less
Journal Entry
My final day on the KM. I got up late, again, awesome. Missed breakfast, again, not awesome.
Finally saw another ship today, a whole 11 days at sea and I finally see another ship. I bet if I were to look out tonight I might see one. I quickly ran up to the bridge to see what ship it was. The answer, Ocean Prince, an empty cargo vessel heading toward china. It quickly disappeared as we were going in opposite directions.
Lunch today was pasta with some sort of pesto sauce. I really stocked up on the garlic bread. After lunch I drove the ship again, just cause I could. At 1430 or so most of the science party watched the movie Serenity in the lounge.
After the movie there was a bit of time to kill between dinner, which I spent on the bridge with the captain, flying a kite and scaring off seabirds.
Dinner was Surf and Turf. Filet mignon and snow crab. Fresh bread was also available. They pulled out all the stops for the final dinner at sea. Dessert was baklava and delicious. The smell of the galley permeated the entire ship well before it was dinner time.
After dinner many of us went out to the back deck to watch the sunset. A mighty fine one I might add, with brilliant crepuscular rays in many directions. In all, probably one of the best sunsets of the entire cruise and definitely the best sunset where the sun couldn’t actually be seen.
This will be my last entry from sea for this cruise. Cleaning needs to be done and we are scheduled to pull into port around 0700 tomorrow.
EXITS Cruise 2 Day 10
02011.01.23
20:41HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 18 53.088 N
Lon: 163 3.488 W
Speed: 12 Kts
Heading: 80
Sal: 34.384 PSU
SST: 26 °C
Pres: 1014 mbar
Air Temp: 24 °C
Weather and Sea State Observations
Swell height perhaps 1-2 meters. Cloud cover is 50%
Journal Entry
Finally got to wake up late today, so late in fact that I managed to miss breakfast. A bummer too as I saw cinnamon rolls. Today was largely uneventful, I read a book, took some photos, disassembled some instruments and ate food.
I started with the instrument disassembly. Just taking the LADCP off the CTD frame. If you are confused by all the TLAs well, have some more! While preparing the VMP for packing, we discovered some XBTs and XSVs, this became a source of discussion and I was confused quickly.
Lunch was oven baked fried chicken (having an actual fryer on board would be not smart) and sausage rolls. Having lunch with a fellow from New Zealand (also my watchmate), I was eager to hear his opinion of them. He said they were good but not quite like the ones at home, noting that the pastry bread they were wrapped with was not quite right. I didn’t get the opinion of any of the UK ex-pats.
After lunch I went down to the lab and read a book, though it was not a physical book, but an eBook on a kindle. I made it through about half of Enders Game before one of the oilers offered to take me back into some of the engineering sections so that I may take some photos. Though first he took me to the shaft seal, an area we didn’t look at last time. The shaft seal is responsible for keeping the water on the outside of the ship where the propeller drive shaft penetrates the hulls (we have two). Much discussion was had about the possible outcomes of this seal suddenly failing. It was decided that we would probably not make it out of the compartment we were in before it was entirely flooded and likely wouldn’t have time to even get the word out of the danger to the ship.
Dinner was ribs and huge piles of it. Not feeling too hungry I had some salad and a bowl of baked beans.
Returning to the lab I finished Enders Game and stitched some of the panoramas together.
I told some of the ABs that I considered going to Cal Maritime Academy (I told some of the mates this too). They told me that I should work the deck as an AB first, otherwise I would not be able to effectively command people under me unless I had worked the deck previously. Then they said to stick with oceanography as “I got brains.”
Tomorrow is the last full day on the ship.
EXITS Cruise 2 Day 9
02011.01.22
19:47HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 18 2.150 N
Lon: 167 53.344 W
Speed: 10.8 Kts
Heading: 79
Sal: – PSU
SST: 25 °C
Pres: 1012 mbar
Air Temp: 26 °C
Weather and Sea State Observations
The seas have calmed. Swell height perhaps 2-3 meters. Cloud cover is 50% and rain could be seen in the distance.
Journal Entry
Got up as usual for what would be my last watch of the cruise. When I first got up we were still in transit, meaning I would have no work. But I decided that I should go down anyway and so did my watchmate. After about an hour of transit, we were at our last station. Everything started fine, CTD in the water, pinger pinging, a faint bottom echo but at least it was there. Then some 1000 meters down, the bottom echo disappears. Not late after, the entire trace disappears. We are flying blind, all we have is the initial depth from a transducer on the ship and how much wire we have spooled out.
The decision was made to go to 5000 meters wire out, about 100 meters short of what should be the bottom. Since there was no indication of a bottom hit, we think all went well. Since the downward looking LADCP can usually see the bottom about from about 200 meters, we should have complete data for the entire water column (the important bit).
Breakfast was an egg, ham, and cheese muffin sandwich. Tasty. I went to bed after breakfast and ended up sleeping through lunch. The menu said that today’s lunch was “pizza day!” so I’m a bit disappointed that I missed it. Though, perhaps I have been eating too much.
All the while I was sleeping, a mooring deployment was occurring. This one took a bit longer than the others as it was 2000 meters deeper. I did watch as they dropped the anchor, apart from hitting the A-frame with the weight, uneventful.
After the ship was no longer tethered to the mooring, we went chasing after what would soon be the subsurface buoy. Sure enough we found it being dragged along the surface and the ship was quickly turned so that we could follow it. Perhaps 10 minutes later it was pulled beneath the waves (as designed).
Dinner was gyoza and a teriyaki beef kebab. The kebab had some bell peppers and mushrooms along with the meats. Everything was cooked perfectly. Dinner felt a bit more high energy, people are excited to be heading to port and the science party was feeling pleased with the way things went, particularly the successful redeployment of the moorings.
It is a two and a half day steam back to port and I’m not sure what will be done during this time, though some packing up and disassembly of some instruments will occur for sure. I’ve heard rumors (which travel faster and change more quickly on a ship than any other place) that we will be picking up a drifting instrument somewhere close to Molokai.
The moon has finally started to rise late enough that I might get some stargazing in tonight. I also don’t need to be up at 0400 tomorrow!
EXITS Cruise 2 Day 8
02011.01.19
18:46HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 17 16.407 N
Lon: 168 34.072 W
Speed: 0.5 Kts
Heading: 73
Sal: – PSU
SST: 26 °C
Pres: 1012 mbar
Air Temp: 25 °C
Weather and Sea State Observations
A clear day. Swell height perhaps 3-4 meters. Cloud cover is 25%. A bit more windy than usual. The seas are rough.
Journal Entry
The day started with the recovery of a CTD, which went well, no issues. Then we had a one hour transit to the deployment site of the first mooring. This was just slightly boring as there was not enough time to do things like download the LADCP data. When we got to the station, everything was ready to go and then the pinger was turned on. It seemed alright at first, but was chirping strangely once the package was in the air (for deployment). We deployed and went back into the lab to start the data logger (we get real time data from the CTD itself). On observing the hydrophone display, the line was jumping all over the place after a few seconds, it just cut out all together. The decision was made to recover right away and to see if the problem could be fixed.
The pinger seemed to function somewhat when given some percussive maintenance (we hit it). It was eventually taken off the rosette and taken into the lab. A quick disassembly revealed that oil was likely leaking from a reservoir where the sound is made. The pinger was switched with a spare, weaker signal but reliably working. The whole process took about 45 minutes.
Breakfast today was good ol’ fashioned pancakes. Quite delicious I might add. I also had my usual bowl of fruit and bacon.
Due to mooring deployment activities, which I have very little involvement in, I have nothing really to do until 0400 tomorrow. As usual I went back to bed after my early morning watch.
Lunch today was a tuna melt, with TWO kinds of cheese. I ate sitting at a table with one of the stewards (cooks/galley crew) and he didn’t even know about the two cheeses until he took a bite. All of this cheese was a welcome surprise. With the cheese I had put on my salad, this was a 5 cheese lunch! Also served were buffalo chicken wings, though I didn’t have any.
I filled my time by browsing the media files on the ships share drive. I discovered video from one of the ROV cruises looking at an erupting underwater volcano. There were also images from the Challenger Deep.
As far as I know, the mooring deployment went smoothly. Right up until the end that is. When it was time to drop the anchor the release mechanism worked as expected but the webbing managed to twist around in one the ‘i’ rings, getting caught. A pocket knife was quickly taped to a pole (using electrical tape) and the webbing was cut in a rather funny sawing motion. The weight soon disappeared into the deep.
After a short steam the next mooring was put in with no issues that I’m aware of.
Dinner was a rolled beef thing with cheese and mushrooms I think. There was also shrimp wrapped in that flakey thin bread used for baklava. I had two dinner rolls at the suggestion of one of the stewards.
Sleep! Word on the ship (where rumors travel faster than any place I’ve even been) is that we are returning a day early 25th rather than the 26th as originally planned.
EXITS Cruise 2 Day 7
02011.01.20
20:05HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 16 52.502 N
Lon: 168.38.709 W
Speed: 0 Kts
Heading: Holding Station
Sal: 34.450 PSU
SST: 26.17 °C
Pres: 1012 mbar
Air Temp: 24 °C
Weather and Sea State Observations
A incredibly nice day. Swell height perhaps 3-4 meters. Cloud cover is 25%
Journal Entry
I guess one could say I’ve developed a routine now. It isn’t as difficult to wake up at the strange hours now and I don’t feel like I’m sleep deprived. A few rounds of CTD casts were completed on my watch and the VMP was recovered. The VMP is so much easier to recover at night, largely due to a flashing strobe on the top of it. With no other ships around if you are looking out at the darkness and see something flashing, it’s the VMP.
Afterward, I had breakfast, today could best be described as a nutty day. Breakfast was whole wheat pecan pancakes that my mom would have been proud of. And, as usual, I went to bed after breakfast.
And after sleep I assisted with a broken winch for a bit. This was the big event today, a broken winch. Lucky for us, the CTD was on deck when the winch decided to break. After about 4 hours of engineers running around with manuals larger than most dictionaries, we were up and running again.
Lunch today was a “chili cook off.” I’m not sure if there was a competition, but I preferred the beef chili due to its right amount of spice. After lunch I did some studying. My afternoon watch stared with the CTD already in the water on its way up. The pinger we use to track the package was malfunctioning so we had to bring it on deck for a quick replacement.
Thinking about it, today was also a day of things breaking. The CTD winch broke, the CTD pinger broke, the weight release on the VMP broke, I’m told something might have broken on the moorings. We have several ideas as to what the cause might be. Aliens, the winch was making some funny noises this morning and abduction was feared. An “Andrew singularity,” during the VMP recovery all three people on board named Andrew were in the same place for the first time, causing massive gravitational disturbances throughout the ship. Government mind control, a lining of tin foil was noticed around one of the labs.
Due to other activities that pulled my watchmate away from CTD duties, I was left in charge of the CTD for about an hour. This involves coordinating a few people and making sure the CTD doesn’t hit the bottom. I’ve never made these decisions by myself so it was interesting to be responsible for a bit. In hindsight, I was rather comfortable with running the operation, I guess this is good news for the future.
Tomorrow the first of the moorings is going back in the water at some early morning crazy hour and the swell is predicted to get larger. The good news about the swell is, it is long period so there is a nice rocking motion.
EXITS Cruise 2 Day 6
02011.01.19
18:46HST
Barna, A
R/V Kilo Moana
Conditions
Lat: 16 57.231 N
Lon: 168 45.338 W
Speed: 0 Kts
Heading: Holding Station
Sal: 34.354 PSU
SST: 25.90 °C
Pres: 1010 mbar
Air Temp: 24 °C
Weather and Sea State Observations
A clear day. Swell height perhaps 1-2 meters. Cloud cover is 10% or less.
Journal Entry
As is the routine, I got up at 0345 to go on watch, which consisted of a continuation of the yo-yo casts that were being done when I went to bed. After 4 hours of looking at the acoustic timing plot, I just went back to bed. There were no events or really any work being done during my watch.
The daily routine has become regular enough, and I’m up at strange enough hours, that I have lost track of what day it is. Thinking it was Tuesday all day, only to be corrected by “the other” Andrew’s watch. There have been rumors of a possible return a day early, but I think a much of the ship time as possible will be used.
After my nap I helped deploy the VMP, which also went smoothly, largely due to the small sea state. Lunch was had, today it was beef stroganoff which I had on top of rice and appropriate noodles.
I came to the realization today that being on this cruise with the early morning watch will probably cause the total number of sunrises I’ve seen to at least double.
The VMP was recovered in the late afternoon. Soon after, the ship needed to exit the monument boundaries (we are close enough to the atoll to be in protected waters) in order to drain the sewage tanks. This ship is incredible, we have almost all the services and utilities as a city (except for post obviously). Seeing how much space is devoted to just keeping us humans comfortable really makes me appreciate the modern services we have on land. On this ship I’ve seen where the water is made, the sewage is processed, the trash is disposed, where the telephones are switched, where the power is generated, and where the internet provided. It is a huge complex machine that requires constant maintenance.
Dinner today was Mexican! A taste of home if you will. What I was most excited about though, was the copious amounts of guacamole available.
There are two things that never sleep on this ship:
Science
Corrosion
There have been rumors circulating of a 5 meter (ish) swell on its way.